Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI7084WVIZ
IGVFFI7084WVIZ
released
validated
Json view
File Set
IGVFDS1219HABJ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5680BDYS, IGVFFI3566RLAF, IGVFFI4828MTIT, IGVFFI6879UUFN
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x2_NGS5
md5sum
a976d783b5bc2fa69feca4857722918d
Content MD5sum
530d01d6a0f7883477d0b68da983c817
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x2_NGS5_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3566RLAF
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
5
4.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4828MTIT
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
5
9.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5680BDYS
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
5
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6879UUFN
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
5
1.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5189FTFS
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples