IGVFFI6966IHGR

released
validated
1{
2    "@context": "/terms/",
3    "@id": "/configuration-files/IGVFFI6966IHGR/",
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9    "accession": "IGVFFI6966IHGR",
10    "aliases": [
11        "buenrostro-bernstein:SS-LS_2012_seqspec"
12    ],
13    "assay_titles": [
14        "SHARE-seq"
15    ],
16    "audit": {},
17    "award": {
18        "@id": "/awards/HG011986/",
19        "component": "mapping"
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22    "content_md5sum": "a63b3c2791c91410b44a5eb94b18f277",
23    "content_type": "seqspec",
24    "creation_timestamp": "2024-09-17T22:50:38.746287+00:00",
25    "file_format": "yaml",
26    "file_set": {
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34        "assay_term": {
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36            "term_name": "single-cell RNA sequencing assay"
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44                    "Biosample",
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48                "accession": "IGVFSM8719IQYM",
49                "classifications": [
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52                "sample_terms": [
53                    {
54                        "@id": "/sample-terms/UBERON_0000955/",
55                        "status": "released",
56                        "term_name": "brain"
57                    }
58                ],
59                "status": "released",
60                "summary": "Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)",
61                "taxa": "Mus musculus"
62            }
63        ],
64        "status": "released",
65        "summary": "single-cell RNA sequencing assay (SHARE-seq)"
66    },
67    "file_size": 1230,
68    "gene_list_for": [],
69    "href": "/configuration-files/IGVFFI6966IHGR/@@download/IGVFFI6966IHGR.yaml.gz",
70    "input_file_for": [
71        "/matrix-files/IGVFFI9574KLIF/",
72        "/matrix-files/IGVFFI9304NYFI/"
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74    "integrated_in": [],
75    "lab": {
76        "@id": "/labs/jason-buenrostro/",
77        "title": "Jason Buenrostro, Broad"
78    },
79    "loci_list_for": [],
80    "md5sum": "8527b12cdf6cae907a24a7ecf30da6f7",
81    "quality_metrics": [],
82    "release_timestamp": "2025-03-28T21:18:51.299780+00:00",
83    "s3_uri": "s3://igvf-files/2024/09/17/13b705ec-0ad2-4a6b-987b-9d2a69b9889c/IGVFFI6966IHGR.yaml.gz",
84    "schema_version": "7",
85    "seqspec_of": [
86        "/sequence-files/IGVFFI3851WKAQ/",
87        "/sequence-files/IGVFFI4227ZFZB/"
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89    "status": "released",
90    "submitted_by": {
91        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
92        "title": "Siddarth Wekhande"
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94    "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/SS-LS_2012_seqspecv3.yaml.gz",
95    "summary": "seqspec of IGVFFI3851WKAQ, IGVFFI4227ZFZB",
96    "upload_status": "validated",
97    "uuid": "13b705ec-0ad2-4a6b-987b-9d2a69b9889c",
98    "validate_onlist_files": true
99}