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INDEXED
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ConfigurationFile
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IGVFFI6959BHRC
IGVFFI6959BHRC
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3124WCBQ, IGVFFI1997GAYY, IGVFFI2556EKEZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8647_seqspec
md5sum
6dd91af68fce6c0737f0478f58dde12f
Content MD5sum
cbc2dba70736902e09fdcd8e7434cbb4
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI3124WCBQ_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1997GAYY
fastq
reads
8647
Read 2
Illumina NovaSeq X
22LMVNLT4
2.1 GB
Jason Buenrostro, Broad
validated
IGVFFI2556EKEZ
fastq
reads
8647
Barcode index
Illumina NovaSeq X
22LMVNLT4
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI3124WCBQ
fastq
reads
8647
Read 1
Illumina NovaSeq X
22LMVNLT4
2.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)