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INDEXED
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ConfigurationFile
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IGVFFI6952QYSK
IGVFFI6952QYSK
released
validated
Json view
File Set
IGVFDS7297BZEA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1897ZSBS, IGVFFI8340JGUQ, IGVFFI0550QVDZ, IGVFFI2623ZOPP
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x5_NGS1
md5sum
c377e90799aaa92b573a4bc20cc232bf
Content MD5sum
52ef44f5296395ce49f24ace7737f363
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x5_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0550QVDZ
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
1
6.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1897ZSBS
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
1
3.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2623ZOPP
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
1.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8340JGUQ
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
979 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1640UGWP
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples