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INDEXED
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ConfigurationFile
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IGVFFI6912JDMN
IGVFFI6912JDMN
released
validated
Json view
File Set
IGVFDS4642GQLX
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2191QMQU, IGVFFI1674CBWZ, IGVFFI0471EFBH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4304_seqspec
md5sum
8d96509b3569ceca1d52ed61e8592daa
Content MD5sum
6021849d63c547695cdc6497764b9b1d
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2191QMQU_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0471EFBH
fastq
reads
4304
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
2.0 GB
Jason Buenrostro, Broad
validated
IGVFFI1674CBWZ
fastq
reads
4304
Read 2
Illumina NovaSeq 6000
H75F7DSX5
2.5 GB
Jason Buenrostro, Broad
validated
IGVFFI2191QMQU
fastq
reads
4304
Read 1
Illumina NovaSeq 6000
H75F7DSX5
5.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0636UWGR
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 199)