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INDEXED
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ConfigurationFile
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IGVFFI6838ZGFZ
IGVFFI6838ZGFZ
released
validated
Json view
File Set
IGVFDS3634TPOY
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2797UCDW, IGVFFI1038LZVL, IGVFFI3472WGIO, IGVFFI3025RYMZ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp9_rna_10x1_NGS2
md5sum
6d6d3c72bec1c710db39f59aaf064b0c
Content MD5sum
48845b31d06a461d4dfa75dffd2ce1b8
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp9_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1038LZVL
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHYLT3
2
17 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2797UCDW
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
2
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3025RYMZ
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHYLT3
2
7.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3472WGIO
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
2
2.0 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9678IFHW
MultiplexedSample
B cell
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford