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INDEXED
Home
/
ConfigurationFile
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IGVFFI6692RJTC
IGVFFI6692RJTC
released
validated
Json view
File Set
IGVFDS8054AFXK
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI6662PVEM, IGVFFI3001RHDA, IGVFFI5828JUEI, IGVFFI1035VYAY
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_atac_10x3_NGS5
md5sum
923b741077c3b8cb84745e955e510727
Content MD5sum
2b30881736d20facbda40d0f6343d5d8
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_atac_10x3_NGS5_atac_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1035VYAY
fastq
reads
1
Read 2
Illumina NovaSeq X
225JTGLT3
5
5.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3001RHDA
fastq
reads
1
Read 1
Illumina NovaSeq X
225JTGLT3
5
5.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5828JUEI
fastq
reads
1
Barcode index
Illumina NovaSeq X
225JTGLT3
5
2.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6662PVEM
fastq
reads
1
Illumina NovaSeq X
225JTGLT3
5
1.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7114MTSH
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples