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INDEXED
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ConfigurationFile
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IGVFFI6672DITW
IGVFFI6672DITW
released
validated
Json view
File Set
IGVFDS7911YQZW
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4548IMBD, IGVFFI9183WJEW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8279_seqspec
md5sum
7b0212e4f2a17d3c4bd72dd52fd4b629
Content MD5sum
8eed25c237c221f7d3c52836460cc98e
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8279_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4548IMBD
fastq
reads
8279
Read 1
Illumina NovaSeq X
22TMH5LT3
4.9 GB
Jason Buenrostro, Broad
validated
IGVFFI9183WJEW
fastq
reads
8279
Read 2, Barcode index
Illumina NovaSeq X
22TMH5LT3
6.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1072XOVT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)