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IGVFFI6587ONPF

released
validated
File Set
IGVFDS0886UBIB(CRISPR activation Perturb-seq integrating a guide (sgRNA) library targeting transcription start sites in many genes)
Summary
seqspec of IGVFFI8843ZBZD, IGVFFI9089DYXF
File Format
yaml
Content Type
seqspec
Aliases
charles-gersbach:hPA-Seqspec-perturbseq-10xlane1-GEX-L1
md5sum
6407a9917f57ea9247b8c9658795274d
Content MD5sum
5805f10ead720cdecee2a75a18380860
File Size
1.3 KB
Submitted File Name
/work/rr151/SamAIM2neuro_data/AstrocytehPA-Seqspec-10xlane1-GEX-L1.yaml.gz
Checkfiles Version
v23
Attribution
Charles Gersbach, Duke

seqspec File Of

2 items
Read Names
fastq
reads
4
Read 1
1
3.4 GB
Charles Gersbach, Duke
validated
fastq
reads
4
Read 2
1
8.3 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens astrocyte cell treated with 10 ng/mL Neurotrophin-3, 20 ng/mL Brain-Derived Neurotrophic Factor, modified with CRISPRa Sp-dCas9-2xVP64-2A-Puro, transduced (lentivirus) with a guide library