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INDEXED
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ConfigurationFile
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IGVFFI6435JSJB
IGVFFI6435JSJB
released
validated
Json view
File Set
IGVFDS8528TQHC
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9611UAWB, IGVFFI3550CIIB
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2104_seqspec
md5sum
0eda7bd95052f60bef1dbadd829c0e3f
Content MD5sum
492e35a00637caaa414447821952fa2d
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2104_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3550CIIB
fastq
reads
261
Read 2, Barcode index
Illumina NovaSeq 6000
768 MB
Jason Buenrostro, Broad
validated
IGVFFI9611UAWB
fastq
reads
261
Read 1
Illumina NovaSeq 6000
438 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9781HISX
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)