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INDEXED
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ConfigurationFile
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IGVFFI6364IYFT
IGVFFI6364IYFT
released
validated
Json view
File Set
IGVFDS7425QRXB
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0866MYPP, IGVFFI0336RPVF, IGVFFI9003FKDK
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI0336RPVF_seqspec
md5sum
aa03621de18e08ea339c6c14ffb5f7c1
Content MD5sum
dfdce6d98d491fdd0b5fa8a2737c3120
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI0336RPVF_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0336RPVF
fastq
reads
5
Read 1
Illumina NovaSeq 6000
1.8 GB
Jason Buenrostro, Broad
validated
IGVFFI0866MYPP
fastq
reads
5
Read 2
Illumina NovaSeq 6000
1.9 GB
Jason Buenrostro, Broad
validated
IGVFFI9003FKDK
fastq
reads
5
Barcode index
Illumina NovaSeq 6000
592 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1242TZJM
PrimaryCell
colon
Mus musculus C57BL/6J colon cell