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INDEXED
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ConfigurationFile
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IGVFFI6319LMGZ
IGVFFI6319LMGZ
released
validated
Json view
File Set
IGVFDS4668AHMA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI7819QUKZ, IGVFFI1221DUMU, IGVFFI6733AQKX, IGVFFI4720SSQW
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_rna_10x3_NGS3
md5sum
5c4ac0c8acb522ff4fbc7aa8f3a80ee1
Content MD5sum
a71bb7f8037e4a6f4a084346a58a17b4
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_rna_10x3_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1221DUMU
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
539 MB
Ansuman Satpathy, Stanford
validated
IGVFFI4720SSQW
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHMLT3
3
1.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6733AQKX
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHMLT3
3
4.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7819QUKZ
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
3
553 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8276PHGD
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford