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INDEXED
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IGVFFI6265KQCD
IGVFFI6265KQCD
released
validated
Json view
File Set
IGVFDS6310VXMX
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI4067LHOZ, IGVFFI4744MLNT, IGVFFI8454EYKE, IGVFFI1104DNVL
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_atac_10x2_NGS1
md5sum
54244dbb2624557e4fc28784ada9f040
Content MD5sum
39a5cffee209e3c17de5c19cd90772bf
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_atac_10x2_NGS1_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1104DNVL
fastq
reads
1
Read 1
Illumina NovaSeq X
223JH2LT3
5
8.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4067LHOZ
fastq
reads
1
Barcode index
Illumina NovaSeq X
223JH2LT3
5
4.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4744MLNT
fastq
reads
1
Illumina NovaSeq X
223JH2LT3
5
1.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8454EYKE
fastq
reads
1
Read 2
Illumina NovaSeq X
223JH2LT3
5
8.1 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8961ZZQN
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford