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INDEXED
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ConfigurationFile
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IGVFFI6218QCFR
IGVFFI6218QCFR
released
validated
Json view
File Set
IGVFDS9828TNJA
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9489JPOG, IGVFFI0114RXZY
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8383_seqspec
md5sum
114748a3a0f3cb503b8b033d6c283eab
Content MD5sum
590896f916052882960acfdcadf08238
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8383_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0114RXZY
fastq
reads
8383
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
6.5 GB
Jason Buenrostro, Broad
validated
IGVFFI9489JPOG
fastq
reads
8383
Read 1
Illumina NovaSeq X
22V3MJLT3
4.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7652DCKY
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)