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INDEXED
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ConfigurationFile
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IGVFFI6123WGVR
IGVFFI6123WGVR
released
validated
Json view
File Set
IGVFDS4942IIYS
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI8734QMQW, IGVFFI3274DQST, IGVFFI5932BAOK, IGVFFI0139WHXA
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp5_rna_10x1_NGS3
md5sum
a02d9f1717ab410b5068073cb6920978
Content MD5sum
e1e3b2d68c673d9a59026e486752e565
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp5_rna_10x1_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0139WHXA
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
7
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3274DQST
fastq
reads
1
Read 1
Illumina NovaSeq X
223JJCLT3
7
5.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5932BAOK
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
7
1.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8734QMQW
fastq
reads
1
Read 2
Illumina NovaSeq X
223JJCLT3
7
13 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1143WWLK
MultiplexedSample
GM25256 (WTC-11)
,
H1-hESC
,
H9
,
HEK293T
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford