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INDEXED
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IGVFFI6114VBKZ
IGVFFI6114VBKZ
released
validated
Json view
File Set
IGVFDS2183INAQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2979RGGQ, IGVFFI1779UNVR, IGVFFI0701QRLV
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI1779UNVR_seqspec
md5sum
cd5b79de88eb4f6ebc829a66a809daed
Content MD5sum
c877f3ff5c4c3c353f199a1e07e828a7
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI1779UNVR_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0701QRLV
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
8.5 GB
Jason Buenrostro, Broad
validated
IGVFFI1779UNVR
fastq
reads
1
Read 1
Illumina NovaSeq 6000
20 GB
Jason Buenrostro, Broad
validated
IGVFFI2979RGGQ
fastq
reads
1
Read 2
Illumina NovaSeq 6000
21 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4239FRER
InVitroSystem
colonic epithelium
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days