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INDEXED
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IGVFFI6044TRRB
IGVFFI6044TRRB
released
validated
Json view
File Set
IGVFDS1554OVKW
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3368XUML, IGVFFI6943YYXC
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8391_seqspec
md5sum
ea55dc4b9b1b5d984fc8fdb665f7dd32
Content MD5sum
bea8899ff98ad7a2df8841d56af8fbb5
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8391_seqspec.yaml.gz
Checkfiles Version
v17
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3368XUML
fastq
reads
8391
Read 1
Illumina NovaSeq X
22V3MJLT3
5.3 GB
Jason Buenrostro, Broad
validated
IGVFFI6943YYXC
fastq
reads
8391
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
7.6 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9407UDAJ
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 603)
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad