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INDEXED
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IGVFFI5993BXSD
IGVFFI5993BXSD
released
validated
Json view
File Set
IGVFDS2000OICT
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI4793FQMP, IGVFFI3485ADIZ, IGVFFI6392IYRV, IGVFFI6792GSSP
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp3_rna_10x1_NGS2
md5sum
222100ae849c176368d3edfa7a33fb77
Content MD5sum
86ed3a947af656207865f66da48a8b82
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp3_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3485ADIZ
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
2
1.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4793FQMP
fastq
reads
1
Read 2
Illumina NovaSeq X
223JJCLT3
2
11 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6392IYRV
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
2
1.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6792GSSP
fastq
reads
1
Read 1
Illumina NovaSeq X
223JJCLT3
2
4.8 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4259POAT
MultiplexedSample
GM25256 (WTC-11)
,
H9
,
HepG2
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford