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IGVFFI5930DUDJ

released
validated
File Set
IGVFDS2220HHTN(gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI4137IEHI, IGVFFI4398ITZJ, IGVFFI4961EMLW, IGVFFI7687RJYL
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane2_seqlane2_CS1_seqspec
md5sum
3e177f312054f2fe95819c613bdabc61
Content MD5sum
d58f2a728ec4316bbfb23133e3851432
File Size
1.5 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS2220HHTN_2_CS1_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
AAAMCTVHV
2
314 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
326 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
1.0 GB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAMCTVHV
2
1.2 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library