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IGVFFI5881EHHY

released
validated
File Set
IGVFDS8623UWKX(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI0309CZNF, IGVFFI2221EFRC
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3845_seqspec
md5sum
430b3498af8a04f46d3dbd76893eb378
Content MD5sum
c4d45a1d3065969d396b2d39701177b6
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3845_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3845
Read 1
H22KKDRX5
543 MB
Jason Buenrostro, Broad
validated
fastq
reads
3845
Read 2, Barcode index
H22KKDRX5
903 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated