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INDEXED
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ConfigurationFile
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IGVFFI5868FQET
IGVFFI5868FQET
released
validated
Json view
File Set
IGVFDS3629MIXK
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2174QBKX, IGVFFI4554QCKL, IGVFFI5393FZMI
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4350_seqspec
md5sum
82189991bcedc48c7fc8a39a0f50fb41
Content MD5sum
50f568fc832d1dd4b13fd729f76483ca
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2174QBKX_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2174QBKX
fastq
reads
4350
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.0 GB
Jason Buenrostro, Broad
validated
IGVFFI4554QCKL
fastq
reads
4350
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI5393FZMI
fastq
reads
4350
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0700KOZX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 207)