Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI5743QTLK
IGVFFI5743QTLK
released
validated
Json view
File Set
IGVFDS2361VFLK
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0630NCQD, IGVFFI8930RDLU, IGVFFI9493PEZI, IGVFFI9943IERL
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x4_NGS3
md5sum
a6d9e5b93c81e68ec046d2589fb4032d
Content MD5sum
e892af24635bb00bacce16603dae685d
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x4_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0630NCQD
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
3
943 MB
Ansuman Satpathy, Stanford
validated
IGVFFI8930RDLU
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
3
958 MB
Ansuman Satpathy, Stanford
validated
IGVFFI9493PEZI
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
3
3.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9943IERL
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
3
7.6 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3762JDVU
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford