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IGVFFI5725AEYP

released
validated
File Set
IGVFDS2133JAFB(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI7653WTAT, IGVFFI5581RKRW, IGVFFI4172XVXM, IGVFFI2659ZSIM
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane4_seqlane1_exprs_seqspec
md5sum
c1f671b47960d9bb66dc8c6d6ae57699
Content MD5sum
aa020e27582bc64d7dbf840e7a4d8294
File Size
1.4 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS2133JAFB_1_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 2
AAAMCTVHV
1
7.5 GB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
1
3.3 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
1
907 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
1
922 MB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane4) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library