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INDEXED
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IGVFFI5600LCZE
IGVFFI5600LCZE
released
validated
Json view
File Set
IGVFDS5111SPGA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1739UALI, IGVFFI7077BGII, IGVFFI7144UAPA, IGVFFI1931ACCE
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp2_rna_10x1_NGS1
md5sum
d8044ae62b5fa896cb555d8038c56e41
Content MD5sum
b87696e735bd1768f5903c39a6c80341
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp2_rna_10x1_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1739UALI
fastq
reads
1
Read 1
Illumina NovaSeq X
2257H3LT3
7
6.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1931ACCE
fastq
reads
1
Illumina NovaSeq X
2257H3LT3
7
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7077BGII
fastq
reads
1
Illumina NovaSeq X
2257H3LT3
7
1.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7144UAPA
fastq
reads
1
Read 2
Illumina NovaSeq X
2257H3LT3
7
14 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3646QLDO
MultiplexedSample
TeloHAEC
multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples