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INDEXED
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ConfigurationFile
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IGVFFI5596OJWV
IGVFFI5596OJWV
released
validated
Json view
File Set
IGVFDS0313KPRX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2410UOXP, IGVFFI7092LWDD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7399_seqspec
md5sum
620d377f23f635210e79b0ece4e7e88a
Content MD5sum
992929f7ba467dc7ed66851413ba1362
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_7399_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2410UOXP
fastq
reads
7399
Read 1
Illumina NovaSeq X
22KFLYLT3
8.4 GB
Jason Buenrostro, Broad
validated
IGVFFI7092LWDD
fastq
reads
7399
Read 2, Barcode index
Illumina NovaSeq X
22KFLYLT3
15 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6577YGTD
Tissue
left cerebral cortex
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)