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INDEXED
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IGVFFI5486UCDZ
IGVFFI5486UCDZ
released
validated
Json view
File Set
IGVFDS5523WWKM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2447KHFY, IGVFFI8022FSUK, IGVFFI6296YCUD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI2447KHFY_seqspec
md5sum
04754f2da32ae2845f2fdfc00e96d1a7
Content MD5sum
b729e58637d85112ade99a6451648edf
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI2447KHFY_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2447KHFY
fastq
reads
1
Read 1
Illumina NovaSeq 6000
3.0 GB
Jason Buenrostro, Broad
validated
IGVFFI6296YCUD
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
1.5 GB
Jason Buenrostro, Broad
validated
IGVFFI8022FSUK
fastq
reads
1
Read 2
Illumina NovaSeq 6000
3.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6844DNNZ
Tissue
colon
Mus musculus C57BL/6J colon tissue