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INDEXED
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ConfigurationFile
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IGVFFI5373MZTL
IGVFFI5373MZTL
released
validated
Json view
File Set
IGVFDS8225URBF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0202KWGE, IGVFFI6773USPP
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5372_seqspec
md5sum
86d51c9891389251f0477503bff201cf
Content MD5sum
f05cb207b86ecfae591d03a318a29bdc
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5372_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0202KWGE
fastq
reads
5372
Read 1
Illumina NovaSeq 6000
22KHF5LT3
7.8 GB
Jason Buenrostro, Broad
validated
IGVFFI6773USPP
fastq
reads
5372
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4121TWUU
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)