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IGVFFI5344RQUC

released
validated
File Set
IGVFDS4653HFNR(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0596FTXK, IGVFFI7053KGZB
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5371_seqspec
md5sum
799af877b74908b96a49af89547639f0
Content MD5sum
d097e7dfc23d0f48dc8caf0b71abe1a8
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5371_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5371
Read 1
22KHF5LT3
7.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
5371
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.7 GB
validated
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
23 GB
validated