Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI5343SBVQ
IGVFFI5343SBVQ
released
validated
Json view
File Set
IGVFDS4752BWME
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI1714BGQB, IGVFFI4097NVZS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7379_seqspec
md5sum
5835a18161452d408f4f338cee6a36b2
Content MD5sum
7cfb95bc98c6ea4e74feb3cc3279a741
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7379_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1714BGQB
fastq
reads
7379
Read 1
Illumina NovaSeq 6000
22KFF5LT3
7.9 GB
Jason Buenrostro, Broad
validated
IGVFFI4097NVZS
fastq
reads
7379
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
14 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)