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IGVFFI5310ASHL

released
validated
File Set
IGVFDS2133JAFB(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI8572PBWR, IGVFFI4882IDVE, IGVFFI8871JYFX, IGVFFI4323HGFN
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane4_seqlane2_exprs_seqspec
md5sum
e461d9cd0587dd02fed7e3b2529016d3
Content MD5sum
2b95667128a92b147fbaaf24111d0976
File Size
1.3 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS2133JAFB_2_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 2
AAAMCTVHV
2
7.3 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
843 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
867 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
3.2 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane4) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library