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IGVFFI5292TPOX

released
validated
File Set
IGVFDS1816FCQL(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8294TYFC, IGVFFI8794VJYW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3851_seqspec
md5sum
652ae8ebe01dbad8ad5a2f8331624f31
Content MD5sum
6906d3c0dfcc9f3752f5d735ec910be1
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3851_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3851
Read 1
H22KKDRX5
800 MB
Jason Buenrostro, Broad
validated
fastq
reads
3851
Read 2, Barcode index
H22KKDRX5
1.3 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated