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INDEXED
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ConfigurationFile
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IGVFFI5277KTGH
IGVFFI5277KTGH
released
validated
Json view
File Set
IGVFDS4493CHDR
(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5887WXJN, IGVFFI9700OSNI, IGVFFI7961ZCVK, IGVFFI8562KVTJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_atac_10x2_NGS3
md5sum
0bb685452e550ebfe8dbe365368663e7
Content MD5sum
8c80e262853563cb756eba759776c85e
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_atac_10x2_NGS3_atac_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5887WXJN
fastq
reads
1
Read 2
Illumina NovaSeq X
22JL3GLT3
3
9.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7961ZCVK
fastq
reads
1
Illumina NovaSeq X
22JL3GLT3
3
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8562KVTJ
fastq
reads
1
Barcode index
Illumina NovaSeq X
22JL3GLT3
3
5.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9700OSNI
fastq
reads
1
Read 1
Illumina NovaSeq X
22JL3GLT3
3
9.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7106DAZZ
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford