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INDEXED
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ConfigurationFile
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IGVFFI5264TNUW
IGVFFI5264TNUW
released
validated
Json view
File Set
IGVFDS0073HSBP
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0157MFIS, IGVFFI9951VBJS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8392_seqspec
md5sum
13f499347508eae956759a57dfaa28a8
Content MD5sum
ed3436a10b10f2c1cbb265fffe9ae481
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8392_seqspec.yaml.gz
Checkfiles Version
v17
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0157MFIS
fastq
reads
8392
Read 1
Illumina NovaSeq X
22V3MJLT3
4.9 GB
Jason Buenrostro, Broad
validated
IGVFFI9951VBJS
fastq
reads
8392
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
7.0 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1833ODAY
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 603)
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad