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INDEXED
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ConfigurationFile
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IGVFFI5209XGRR
IGVFFI5209XGRR
released
validated
Json view
File Set
IGVFDS1647SMVR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0899FVIN, IGVFFI0976SXNI
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8388_seqspec
md5sum
434b7784091d96eafac3faf0f10c7f4f
Content MD5sum
af4c23c2764265797b529d417c5df693
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8388_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0899FVIN
fastq
reads
8388
Read 1
Illumina NovaSeq X
22V3MJLT3
2.7 GB
Jason Buenrostro, Broad
validated
IGVFFI0976SXNI
fastq
reads
8388
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
3.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0974PFBP
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)