Home

IGVFFI5208SSVS

released
validated
File Set
IGVFDS7135ULJC(mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci)
Summary
seqspec of IGVFFI1923YHHK, IGVFFI8450TDKJ, IGVFFI2780VBGU
File Format
yaml
Content Type
seqspec
Aliases
jesse-engreitz:seqspecfile_rna_CRUDO_TAPseq_Auxin0hrs-Rep2-S3
md5sum
061f8e39da0f7df81c8c4b7123e34c0e
Content MD5sum
a3ad307f137fe01c5872af82221fa21c
File Size
1.0 KB
Submitted File Name
/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/seqspec/tapseq_seqspec.out.Auxin0hrs-Rep2-S3.rna.yaml.gz

seqspec File Of

3 items
fastq
reads
1
3
399 MB
Jesse Engreitz, Stanford
validated
fastq
reads
1
3
898 MB
Jesse Engreitz, Stanford
validated
fastq
reads
1
3
117 MB
Jesse Engreitz, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford