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IGVFFI5092ZIKW

released
validated
File Set
IGVFDS2385QENN(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI2702LBCH, IGVFFI8009AYNA, IGVFFI6618WYLI, IGVFFI0113PKVX
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane3_seqlane2_exprs_seqspec
md5sum
4f3a6edb47a36bfa788c45790f87e822
Content MD5sum
9a559ce0b087a015acc0f9f0d136f4b8
File Size
1.3 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS2385QENN_2_exprs_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 2
AAAMCTVHV
2
5.1 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
703 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
2.3 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
655 MB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane3) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library