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INDEXED
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IGVFFI5065MXAP
IGVFFI5065MXAP
released
validated
Json view
File Set
IGVFDS3842BVTL
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI0268EDJD, IGVFFI8634HSPH, IGVFFI7005SJHG, IGVFFI3228SDBA
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x1_NGS3
md5sum
996dd2ea62f477c4792cce8c28bf3cbc
Content MD5sum
72358a15c771eb9ee9beb4e0f363538b
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x1_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0268EDJD
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
3
15 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3228SDBA
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
3
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7005SJHG
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
3
6.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8634HSPH
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
3
1.7 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6422YWWA
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples