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INDEXED
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ConfigurationFile
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IGVFFI5010ONZK
IGVFFI5010ONZK
released
validated
Json view
File Set
IGVFDS5549HQMS
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1685RWMV, IGVFFI0144HURW, IGVFFI0791OBMZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_1017_seqspec
md5sum
c50f397cf5ebd49c5fd70bd586dc1e21
Content MD5sum
4b48abdee7c4277ec4631dce4212e688
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1685RWMV_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0144HURW
fastq
reads
1017
Read 2
Illumina NovaSeq X
22773CLT3
847 MB
Jason Buenrostro, Broad
validated
IGVFFI0791OBMZ
fastq
reads
1017
Barcode index
Illumina NovaSeq X
22773CLT3
747 MB
Jason Buenrostro, Broad
validated
IGVFFI1685RWMV
fastq
reads
1017
Read 1
Illumina NovaSeq X
22773CLT3
1.8 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0278QWHE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 179)