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INDEXED
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ConfigurationFile
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IGVFFI4990ZQDX
IGVFFI4990ZQDX
released
validated
Json view
File Set
IGVFDS6781RGTM
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2730WKVI, IGVFFI2640BGBT
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8384_seqspec
md5sum
8a132c991ace628416fe5a7766246f2d
Content MD5sum
1e62ed0ca754d2b97abc471f0c598e3d
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8384_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2640BGBT
fastq
reads
8384
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
5.7 GB
Jason Buenrostro, Broad
validated
IGVFFI2730WKVI
fastq
reads
8384
Read 1
Illumina NovaSeq X
22V3MJLT3
4.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6880XEAH
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)