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INDEXED
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ConfigurationFile
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IGVFFI4952COCQ
IGVFFI4952COCQ
released
validated
Json view
File Set
IGVFDS5127PEXX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8982AHAK, IGVFFI1818XFDW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8407_seqspec
md5sum
8fb22ca3e99a633ff2326abdb6f9388d
Content MD5sum
c60d1c3147f22dd59ed51aec70941601
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8407_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1818XFDW
fastq
reads
8407
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
9.1 GB
Jason Buenrostro, Broad
validated
IGVFFI8982AHAK
fastq
reads
8407
Read 1
Illumina NovaSeq X
22V3MJLT3
5.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9869JVFX
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)