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INDEXED
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ConfigurationFile
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IGVFFI4919DFLP
IGVFFI4919DFLP
released
validated
Json view
File Set
IGVFDS1581RZTR
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2646PZYE, IGVFFI2624LIWQ, IGVFFI7746NNWG, IGVFFI5545NUKF
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x6_NGS7
md5sum
3b4bcbfb4911f197f4b261ff30782c0a
Content MD5sum
4c6f79fff54710371e50a48c09e27f0f
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x6_NGS7_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2624LIWQ
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
7
7.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2646PZYE
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
7
3.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5545NUKF
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
7
868 MB
Ansuman Satpathy, Stanford
validated
IGVFFI7746NNWG
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
7
837 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5574TAPU
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples