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IGVFFI4852WGBH

released
validated
File Set
IGVFDS5893VQJY(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI8805ZTIW, IGVFFI3240KMDW, IGVFFI0059KQUU, IGVFFI9903KSHL
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp3_atac_10x1_NGS1
md5sum
4265eaef9aaaafb7363b7da16bcab8cd
Content MD5sum
0708a8e0af8c890bdfd6ce8a6f7f371c
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp3_atac_10x1_NGS1_atac_seqspec.yaml.gz
Checkfiles Version
v16

seqspec File Of

4 items
Read Names
fastq
reads
1
Barcode index
222YV7LT3
1
4.8 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
Read 2
222YV7LT3
1
8.9 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
Read 1
222YV7LT3
1
8.9 GB
Ansuman Satpathy, Stanford
validated
fastq
reads
1
222YV7LT3
1
2.1 GB
Ansuman Satpathy, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford