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INDEXED
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ConfigurationFile
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IGVFFI4792JCKV
IGVFFI4792JCKV
released
validated
Json view
File Set
IGVFDS9836XZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6431CIVH, IGVFFI6851KIGV
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7388_seqspec
md5sum
a31c77f0527218a0166d650eaba10f7b
Content MD5sum
06f737d5bb23e4fe84fdf3208e9effee
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_7388_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6431CIVH
fastq
reads
7388
Read 1
Illumina NovaSeq X
22KFLYLT3
5.9 GB
Jason Buenrostro, Broad
validated
IGVFFI6851KIGV
fastq
reads
7388
Read 2, Barcode index
Illumina NovaSeq X
22KFLYLT3
8.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9232VQYX
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 503)