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INDEXED
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ConfigurationFile
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IGVFFI4735KTCJ
IGVFFI4735KTCJ
released
validated
Json view
File Set
IGVFDS6289YQBN
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4188BVSG, IGVFFI0846GWZX
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3818_seqspec
md5sum
3cb380050a7e1ccab1edf9a6e5f5c61a
Content MD5sum
c87ccbe12cfdc609ae32b96dcafe5f44
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3818_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0846GWZX
fastq
reads
3818
Read 2, Barcode index
Illumina NovaSeq 6000
H22KKDRX5
1.8 GB
Jason Buenrostro, Broad
validated
IGVFFI4188BVSG
fastq
reads
3818
Read 1
Illumina NovaSeq 6000
H22KKDRX5
1.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)