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INDEXED
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ConfigurationFile
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IGVFFI4704UDKH
IGVFFI4704UDKH
released
validated
Json view
File Set
IGVFDS3390AOKZ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI7412HABK, IGVFFI6523KQWS, IGVFFI0038OXQU, IGVFFI1399ISCS
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_rna_10x1_NGS2
md5sum
aedaa3152dbb13c99cfd91bb5e275222
Content MD5sum
217e52eb4780558c6e0d7f6f7816c019
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0038OXQU
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
2
1.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1399ISCS
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHMLT3
2
4.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6523KQWS
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
2
1.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7412HABK
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHMLT3
2
8.7 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9282FATG
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford