Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI4629VMME
IGVFFI4629VMME
released
validated
Json view
File Set
IGVFDS3184KNYJ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5926QUTN, IGVFFI5933QFOX, IGVFFI3515NLVH, IGVFFI7250BZHU
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp5_rna_10x4_NGS3
md5sum
6aee24c4f7ddc755333b15dab247d6bf
Content MD5sum
aa67631d90dda4192eb7ce981c38abe5
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp5_rna_10x4_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3515NLVH
fastq
reads
1
Read 2
Illumina NovaSeq X
223JJCLT3
7
13 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5926QUTN
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
7
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5933QFOX
fastq
reads
1
Read 1
Illumina NovaSeq X
223JJCLT3
7
6.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7250BZHU
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
7
1.5 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3106AWHF
MultiplexedSample
GM25256 (WTC-11)
,
H1-hESC
,
H9
,
HEK293T
multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford