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INDEXED
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IGVFFI4559DDGM
IGVFFI4559DDGM
released
validated
Json view
File Set
IGVFDS7297BZEA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI6523RCWU, IGVFFI1029YJGD, IGVFFI0948BNEL, IGVFFI5383ZBHP
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x5_NGS2
md5sum
6bad4371c19cbe6975dff6bf214e5f3b
Content MD5sum
88f336cf3815f447e2f959b40317c9cd
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x5_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0948BNEL
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
2
7.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1029YJGD
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
2
1.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5383ZBHP
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
2
1.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6523RCWU
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
2
3.3 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1640UGWP
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples