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IGVFFI4515HUNL

released
validated
File Set
IGVFDS9151XHFL(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4371FJPY, IGVFFI8293BFAC
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7376_seqspec
md5sum
3382470fc0c898f23e50a3b5e52e9faf
Content MD5sum
5f3538fc4b0363276d4e95c65e1264e1
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7376_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
7376
Read 1
22KFF5LT3
2.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
7376
Read 2, Barcode index
22KFF5LT3
4.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
4.9 GB
validated