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INDEXED
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ConfigurationFile
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IGVFFI4509WYHB
IGVFFI4509WYHB
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4472GWMH, IGVFFI3820FJEW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5366_seqspec
md5sum
c512f85524ea98e358f591c543d6db95
Content MD5sum
23559f3a0d190c98897738d5f7c8c90e
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5366_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3820FJEW
fastq
reads
5366
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
IGVFFI4472GWMH
fastq
reads
5366
Read 1
Illumina NovaSeq 6000
22KHF5LT3
7.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)