Home

IGVFFI4488MOJS

released
validated
File Set
IGVFDS5083GBBF(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6465SWTP, IGVFFI9080RCHI
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5363_seqspec
md5sum
e730b20fc50652ece8a9862a863bc688
Content MD5sum
3fa36defed2848663af995881d2c6636
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5363_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5363
Read 1
22KHF5LT3
5.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
5363
Read 2, Barcode index
22KHF5LT3
8.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.3 GB
validated
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
18 GB
validated